PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.8YC75
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family G2-like
Protein Properties Length: 319aa    MW: 34938 Da    PI: 6.6894
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.8YC75genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like107.95.5e-344296155
      G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Araip.8YC75 42 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 96
                 79****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.4853999IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.3E-324197IPR009057Homeodomain-like
SuperFamilySSF466898.06E-184196IPR009057Homeodomain-like
TIGRFAMsTIGR015571.2E-254297IPR006447Myb domain, plants
PfamPF002491.3E-94495IPR001005SANT/Myb domain
PfamPF143791.7E-23129175IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MYHQKSVPSS SLIGSNSLVH GSSTMDPGNG DNLSNNPNLA SKQRLRWTHE LHERFVDAVA  60
QLGGPDRATP KGVLRVMGVQ GLTIYHVKSH LQKYRLAKYL PDSSSDEGKK TDKKEAGDML  120
SNLDGSPGMQ ITEALKLQME VQKRLHEQLE VQRQLQLRIE AQGKYLKKII EEQQRLSGVL  180
SDVPGSGIAG QVPEDTFPDP DNKTDPATPD PEKAAKERAP AKSLSNESFS SHHEPLTPDS  240
GSPADSPKGE RSTKRQKVSV EATFSKPDMV LPHQILESSM SSYQQSSTVF LTQDQFDPSL  300
GMSARNSEEL EKVGSGSNI
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00252DAPTransfer from AT2G01060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197620.10.0PREDICTED: myb family transcription factor APL-like
RefseqXP_016197619.10.0PREDICTED: myb family transcription factor APL-like
RefseqXP_016197618.10.0PREDICTED: myb family transcription factor APL-like
TrEMBLK7LBB20.0K7LBB2_SOYBN; Uncharacterized protein
STRINGGLYMA15G12940.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86103343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.13e-91G2-like family protein